Shane Freeder b7991a0eaa Misc script fixes ...

Also, grab upstreamCommit

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..

applyPatches.sh

Misc script fixes

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build.sh

Misc script fixes

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edit.sh

Misc script fixes

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mergeUpstream.sh

Misc script fixes

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rebuildPatches.sh

Misc script fixes

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upstreamCommit.sh

Misc script fixes

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wigglePatch.py

Use new build system from Waterfall

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